system_id stringclasses 58
values | code stringlengths 1 84 | label stringlengths 0 1.79k | description stringlengths 3 4.22k ⌀ | parent_code stringlengths 1 30 ⌀ | status stringclasses 8
values | aliases listlengths 0 51 | extra stringlengths 2 2.32k ⌀ |
|---|---|---|---|---|---|---|---|
bio/aa1 | A | Alanine | 2-Aminopropanoic acid | null | null | [
"Ala"
] | {"formula": "CH3-CH(NH2)-COOH", "one_letter": "A", "systematic_name": "2-Aminopropanoic acid", "three_letter": "Ala"} |
bio/aa1 | R | Arginine | 2-Amino-5-guanidinopentanoic acid | null | null | [
"Arg"
] | {"formula": "H2N-C(=NH)-NH-[CH2]3-CH(NH2)-COOH", "one_letter": "R", "systematic_name": "2-Amino-5-guanidinopentanoic acid", "three_letter": "Arg"} |
bio/aa1 | N | Asparagine | 2-Amino-3-carbamoylpropanoic acid | null | null | [
"Asn"
] | {"formula": "H2N-CO-CH2-CH(NH2)-COOH", "one_letter": "N", "systematic_name": "2-Amino-3-carbamoylpropanoic acid", "three_letter": "Asn"} |
bio/aa1 | D | Aspartic acid | 2-Aminobutanedioic acid | null | null | [
"Asp"
] | {"formula": "HOOC-CH2-CH(NH2)-COOH", "one_letter": "D", "systematic_name": "2-Aminobutanedioic acid", "three_letter": "Asp"} |
bio/aa1 | C | Cysteine | 2-Amino-3-mercaptopropanoic acid | null | null | [
"Cys"
] | {"formula": "HS-CH2-CH(NH2)-COOH", "one_letter": "C", "systematic_name": "2-Amino-3-mercaptopropanoic acid", "three_letter": "Cys"} |
bio/aa1 | Q | Glutamine | 2-Amino-4-carbamoylbutanoic acid | null | null | [
"Gln"
] | {"formula": "H2N-CO-[CH2]2-CH(NH2)-COOH", "one_letter": "Q", "systematic_name": "2-Amino-4-carbamoylbutanoic acid", "three_letter": "Gln"} |
bio/aa1 | E | Glutamic acid | 2-Aminopentanedioic acid | null | null | [
"Glu"
] | {"formula": "HOOC-[CH2]2-CH(NH2)-COOH", "one_letter": "E", "systematic_name": "2-Aminopentanedioic acid", "three_letter": "Glu"} |
bio/aa1 | G | Glycine | Aminoethanoic acid | null | null | [
"Gly"
] | {"formula": "CH2(NH2)-COOH", "one_letter": "G", "systematic_name": "Aminoethanoic acid", "three_letter": "Gly"} |
bio/aa1 | H | Histidine | 2-Amino-3-(1H-imidazol-4-yl)- propanoic acid | null | null | [
"His"
] | {"one_letter": "H", "systematic_name": "2-Amino-3-(1H-imidazol-4-yl)- propanoic acid", "three_letter": "His"} |
bio/aa1 | I | Isoleucine | 2-Amino-3-methylpentanoic acide | null | null | [
"Ile"
] | {"formula": "C2H5-CH(CH3)-CH(NH2)-COOH", "one_letter": "I", "systematic_name": "2-Amino-3-methylpentanoic acide", "three_letter": "Ile"} |
bio/aa1 | L | Leucine | 2-Amino-4-methylpentanoic acid | null | null | [
"Leu"
] | {"formula": "(CH3)2CH-CH2-CH(NH2)-COOH", "one_letter": "L", "systematic_name": "2-Amino-4-methylpentanoic acid", "three_letter": "Leu"} |
bio/aa1 | K | Lysine | 2,6-Diaminohexanoic acid | null | null | [
"Lys"
] | {"formula": "H2N-[CH2]4-CH(NH2)-COOH", "one_letter": "K", "systematic_name": "2,6-Diaminohexanoic acid", "three_letter": "Lys"} |
bio/aa1 | M | Methionine | 2-Amino-4-(methylthio)butanoic acid | null | null | [
"Met"
] | {"formula": "CH3-S-[CH2]2-CH(NH2)-COOH", "one_letter": "M", "systematic_name": "2-Amino-4-(methylthio)butanoic acid", "three_letter": "Met"} |
bio/aa1 | F | Phenylalanine | 2-Amino-3-phenylpropanoic acid | null | null | [
"Phe"
] | {"formula": "C6H5-CH2-CH(NH2)-COOH", "one_letter": "F", "systematic_name": "2-Amino-3-phenylpropanoic acid", "three_letter": "Phe"} |
bio/aa1 | P | Proline | Pyrrolidine-2-carboxylic acid | null | null | [
"Pro"
] | {"one_letter": "P", "systematic_name": "Pyrrolidine-2-carboxylic acid", "three_letter": "Pro"} |
bio/aa1 | S | Serine | 2-Amino-3-hydroxypropanoic acid | null | null | [
"Ser"
] | {"formula": "HO-CH2-CH(NH2)-COOH", "one_letter": "S", "systematic_name": "2-Amino-3-hydroxypropanoic acid", "three_letter": "Ser"} |
bio/aa1 | T | Threonine | 2-Amino-3-hydroxybutanoic acid e | null | null | [
"Thr"
] | {"formula": "CH3-CH(OH)-CH(NH2)-COOH", "one_letter": "T", "systematic_name": "2-Amino-3-hydroxybutanoic acid e", "three_letter": "Thr"} |
bio/aa1 | W | Tryptophan | 2-Amino-3-(lH-indol-3-yl)- propanoic acid | null | null | [
"Trp"
] | {"one_letter": "W", "systematic_name": "2-Amino-3-(lH-indol-3-yl)- propanoic acid", "three_letter": "Trp"} |
bio/aa1 | Y | Tyrosine | 2-Amino-3-(4-hydroxyphenyl)- propanoic acid | null | null | [
"Tyr"
] | {"one_letter": "Y", "systematic_name": "2-Amino-3-(4-hydroxyphenyl)- propanoic acid", "three_letter": "Tyr"} |
bio/aa1 | V | Valine | 2-Amino-3-methylbutanoic acid | null | null | [
"Val"
] | {"formula": "(CH3)2CH-CH(NH2)-COOH", "one_letter": "V", "systematic_name": "2-Amino-3-methylbutanoic acid", "three_letter": "Val"} |
bio/aa3 | Ala | Alanine | 2-Aminopropanoic acid | null | null | [
"A"
] | {"formula": "CH3-CH(NH2)-COOH", "one_letter": "A", "systematic_name": "2-Aminopropanoic acid", "three_letter": "Ala"} |
bio/aa3 | Arg | Arginine | 2-Amino-5-guanidinopentanoic acid | null | null | [
"R"
] | {"formula": "H2N-C(=NH)-NH-[CH2]3-CH(NH2)-COOH", "one_letter": "R", "systematic_name": "2-Amino-5-guanidinopentanoic acid", "three_letter": "Arg"} |
bio/aa3 | Asn | Asparagine | 2-Amino-3-carbamoylpropanoic acid | null | null | [
"N"
] | {"formula": "H2N-CO-CH2-CH(NH2)-COOH", "one_letter": "N", "systematic_name": "2-Amino-3-carbamoylpropanoic acid", "three_letter": "Asn"} |
bio/aa3 | Asp | Aspartic acid | 2-Aminobutanedioic acid | null | null | [
"D"
] | {"formula": "HOOC-CH2-CH(NH2)-COOH", "one_letter": "D", "systematic_name": "2-Aminobutanedioic acid", "three_letter": "Asp"} |
bio/aa3 | Cys | Cysteine | 2-Amino-3-mercaptopropanoic acid | null | null | [
"C"
] | {"formula": "HS-CH2-CH(NH2)-COOH", "one_letter": "C", "systematic_name": "2-Amino-3-mercaptopropanoic acid", "three_letter": "Cys"} |
bio/aa3 | Gln | Glutamine | 2-Amino-4-carbamoylbutanoic acid | null | null | [
"Q"
] | {"formula": "H2N-CO-[CH2]2-CH(NH2)-COOH", "one_letter": "Q", "systematic_name": "2-Amino-4-carbamoylbutanoic acid", "three_letter": "Gln"} |
bio/aa3 | Glu | Glutamic acid | 2-Aminopentanedioic acid | null | null | [
"E"
] | {"formula": "HOOC-[CH2]2-CH(NH2)-COOH", "one_letter": "E", "systematic_name": "2-Aminopentanedioic acid", "three_letter": "Glu"} |
bio/aa3 | Gly | Glycine | Aminoethanoic acid | null | null | [
"G"
] | {"formula": "CH2(NH2)-COOH", "one_letter": "G", "systematic_name": "Aminoethanoic acid", "three_letter": "Gly"} |
bio/aa3 | His | Histidine | 2-Amino-3-(1H-imidazol-4-yl)- propanoic acid | null | null | [
"H"
] | {"one_letter": "H", "systematic_name": "2-Amino-3-(1H-imidazol-4-yl)- propanoic acid", "three_letter": "His"} |
bio/aa3 | Ile | Isoleucine | 2-Amino-3-methylpentanoic acide | null | null | [
"I"
] | {"formula": "C2H5-CH(CH3)-CH(NH2)-COOH", "one_letter": "I", "systematic_name": "2-Amino-3-methylpentanoic acide", "three_letter": "Ile"} |
bio/aa3 | Leu | Leucine | 2-Amino-4-methylpentanoic acid | null | null | [
"L"
] | {"formula": "(CH3)2CH-CH2-CH(NH2)-COOH", "one_letter": "L", "systematic_name": "2-Amino-4-methylpentanoic acid", "three_letter": "Leu"} |
bio/aa3 | Lys | Lysine | 2,6-Diaminohexanoic acid | null | null | [
"K"
] | {"formula": "H2N-[CH2]4-CH(NH2)-COOH", "one_letter": "K", "systematic_name": "2,6-Diaminohexanoic acid", "three_letter": "Lys"} |
bio/aa3 | Met | Methionine | 2-Amino-4-(methylthio)butanoic acid | null | null | [
"M"
] | {"formula": "CH3-S-[CH2]2-CH(NH2)-COOH", "one_letter": "M", "systematic_name": "2-Amino-4-(methylthio)butanoic acid", "three_letter": "Met"} |
bio/aa3 | Phe | Phenylalanine | 2-Amino-3-phenylpropanoic acid | null | null | [
"F"
] | {"formula": "C6H5-CH2-CH(NH2)-COOH", "one_letter": "F", "systematic_name": "2-Amino-3-phenylpropanoic acid", "three_letter": "Phe"} |
bio/aa3 | Pro | Proline | Pyrrolidine-2-carboxylic acid | null | null | [
"P"
] | {"one_letter": "P", "systematic_name": "Pyrrolidine-2-carboxylic acid", "three_letter": "Pro"} |
bio/aa3 | Ser | Serine | 2-Amino-3-hydroxypropanoic acid | null | null | [
"S"
] | {"formula": "HO-CH2-CH(NH2)-COOH", "one_letter": "S", "systematic_name": "2-Amino-3-hydroxypropanoic acid", "three_letter": "Ser"} |
bio/aa3 | Thr | Threonine | 2-Amino-3-hydroxybutanoic acid e | null | null | [
"T"
] | {"formula": "CH3-CH(OH)-CH(NH2)-COOH", "one_letter": "T", "systematic_name": "2-Amino-3-hydroxybutanoic acid e", "three_letter": "Thr"} |
bio/aa3 | Trp | Tryptophan | 2-Amino-3-(lH-indol-3-yl)- propanoic acid | null | null | [
"W"
] | {"one_letter": "W", "systematic_name": "2-Amino-3-(lH-indol-3-yl)- propanoic acid", "three_letter": "Trp"} |
bio/aa3 | Tyr | Tyrosine | 2-Amino-3-(4-hydroxyphenyl)- propanoic acid | null | null | [
"Y"
] | {"one_letter": "Y", "systematic_name": "2-Amino-3-(4-hydroxyphenyl)- propanoic acid", "three_letter": "Tyr"} |
bio/aa3 | Val | Valine | 2-Amino-3-methylbutanoic acid | null | null | [
"V"
] | {"formula": "(CH3)2CH-CH(NH2)-COOH", "one_letter": "V", "systematic_name": "2-Amino-3-methylbutanoic acid", "three_letter": "Val"} |
bio/cdn | TTT | F | standard genetic code translation of TTT | null | null | [] | {"standard_aa": "F", "table_count": 27} |
bio/cdn | TTC | F | standard genetic code translation of TTC | null | null | [] | {"standard_aa": "F", "table_count": 27} |
bio/cdn | TTA | L | standard genetic code translation of TTA | null | null | [] | {"differs_in_tables": {"23": "*"}, "standard_aa": "L", "start_codon_in_tables": ["4"], "table_count": 27} |
bio/cdn | TTG | L | standard genetic code translation of TTG | null | null | [] | {"standard_aa": "L", "start_codon_in_tables": ["1", "11", "13", "24", "25", "32", "33", "4", "5"], "table_count": 27} |
bio/cdn | TCT | S | standard genetic code translation of TCT | null | null | [] | {"standard_aa": "S", "table_count": 27} |
bio/cdn | TCC | S | standard genetic code translation of TCC | null | null | [] | {"standard_aa": "S", "table_count": 27} |
bio/cdn | TCA | S | standard genetic code translation of TCA | null | null | [] | {"differs_in_tables": {"22": "*"}, "standard_aa": "S", "table_count": 27} |
bio/cdn | TCG | S | standard genetic code translation of TCG | null | null | [] | {"standard_aa": "S", "table_count": 27} |
bio/cdn | TAT | Y | standard genetic code translation of TAT | null | null | [] | {"standard_aa": "Y", "table_count": 27} |
bio/cdn | TAC | Y | standard genetic code translation of TAC | null | null | [] | {"standard_aa": "Y", "table_count": 27} |
bio/cdn | TAA | stop | standard genetic code translation of TAA | null | null | [] | {"differs_in_tables": {"14": "Y", "27": "Q", "28": "Q", "29": "Y", "30": "E", "31": "E", "33": "Y", "6": "Q"}, "standard_aa": "*", "table_count": 27} |
bio/cdn | TAG | stop | standard genetic code translation of TAG | null | null | [] | {"differs_in_tables": {"15": "Q", "16": "L", "22": "L", "27": "Q", "28": "Q", "29": "Y", "30": "E", "31": "E", "32": "W", "6": "Q"}, "standard_aa": "*", "table_count": 27} |
bio/cdn | TGT | C | standard genetic code translation of TGT | null | null | [] | {"standard_aa": "C", "table_count": 27} |
bio/cdn | TGC | C | standard genetic code translation of TGC | null | null | [] | {"standard_aa": "C", "table_count": 27} |
bio/cdn | TGA | stop | standard genetic code translation of TGA | null | null | [] | {"differs_in_tables": {"10": "C", "13": "W", "14": "W", "2": "W", "21": "W", "24": "W", "25": "G", "27": "W", "28": "W", "3": "W", "31": "W", "33": "W", "4": "W", "5": "W", "9": "W"}, "standard_aa": "*", "table_count": 27} |
bio/cdn | TGG | W | standard genetic code translation of TGG | null | null | [] | {"standard_aa": "W", "table_count": 27} |
bio/cdn | CTT | L | standard genetic code translation of CTT | null | null | [] | {"differs_in_tables": {"3": "T"}, "standard_aa": "L", "table_count": 27} |
bio/cdn | CTC | L | standard genetic code translation of CTC | null | null | [] | {"differs_in_tables": {"3": "T"}, "standard_aa": "L", "table_count": 27} |
bio/cdn | CTA | L | standard genetic code translation of CTA | null | null | [] | {"differs_in_tables": {"3": "T"}, "standard_aa": "L", "table_count": 27} |
bio/cdn | CTG | L | standard genetic code translation of CTG | null | null | [] | {"differs_in_tables": {"12": "S", "26": "A", "3": "T"}, "standard_aa": "L", "start_codon_in_tables": ["1", "11", "12", "24", "26", "32", "33", "4"], "table_count": 27} |
bio/cdn | CCT | P | standard genetic code translation of CCT | null | null | [] | {"standard_aa": "P", "table_count": 27} |
bio/cdn | CCC | P | standard genetic code translation of CCC | null | null | [] | {"standard_aa": "P", "table_count": 27} |
bio/cdn | CCA | P | standard genetic code translation of CCA | null | null | [] | {"standard_aa": "P", "table_count": 27} |
bio/cdn | CCG | P | standard genetic code translation of CCG | null | null | [] | {"standard_aa": "P", "table_count": 27} |
bio/cdn | CAT | H | standard genetic code translation of CAT | null | null | [] | {"standard_aa": "H", "table_count": 27} |
bio/cdn | CAC | H | standard genetic code translation of CAC | null | null | [] | {"standard_aa": "H", "table_count": 27} |
bio/cdn | CAA | Q | standard genetic code translation of CAA | null | null | [] | {"standard_aa": "Q", "table_count": 27} |
bio/cdn | CAG | Q | standard genetic code translation of CAG | null | null | [] | {"standard_aa": "Q", "table_count": 27} |
bio/cdn | CGT | R | standard genetic code translation of CGT | null | null | [] | {"standard_aa": "R", "table_count": 27} |
bio/cdn | CGC | R | standard genetic code translation of CGC | null | null | [] | {"standard_aa": "R", "table_count": 27} |
bio/cdn | CGA | R | standard genetic code translation of CGA | null | null | [] | {"standard_aa": "R", "table_count": 27} |
bio/cdn | CGG | R | standard genetic code translation of CGG | null | null | [] | {"standard_aa": "R", "table_count": 27} |
bio/cdn | ATT | I | standard genetic code translation of ATT | null | null | [] | {"standard_aa": "I", "start_codon_in_tables": ["11", "2", "23", "32", "4", "5"], "table_count": 27} |
bio/cdn | ATC | I | standard genetic code translation of ATC | null | null | [] | {"standard_aa": "I", "start_codon_in_tables": ["11", "2", "32", "4", "5"], "table_count": 27} |
bio/cdn | ATA | I | standard genetic code translation of ATA | null | null | [] | {"differs_in_tables": {"13": "M", "2": "M", "21": "M", "3": "M", "5": "M"}, "standard_aa": "I", "start_codon_in_tables": ["11", "13", "2", "3", "32", "4", "5"], "table_count": 27} |
bio/cdn | ATG | M | standard genetic code translation of ATG | null | null | [] | {"standard_aa": "M", "start_codon_in_tables": ["1", "10", "11", "12", "13", "14", "15", "16", "2", "21", "22", "23", "24", "25", "26", "27", "28", "29", "3", "30", "31", "32", "33", "4", "5", "6", "9"], "table_count": 27} |
bio/cdn | ACT | T | standard genetic code translation of ACT | null | null | [] | {"standard_aa": "T", "table_count": 27} |
bio/cdn | ACC | T | standard genetic code translation of ACC | null | null | [] | {"standard_aa": "T", "table_count": 27} |
bio/cdn | ACA | T | standard genetic code translation of ACA | null | null | [] | {"standard_aa": "T", "table_count": 27} |
bio/cdn | ACG | T | standard genetic code translation of ACG | null | null | [] | {"standard_aa": "T", "table_count": 27} |
bio/cdn | AAT | N | standard genetic code translation of AAT | null | null | [] | {"standard_aa": "N", "table_count": 27} |
bio/cdn | AAC | N | standard genetic code translation of AAC | null | null | [] | {"standard_aa": "N", "table_count": 27} |
bio/cdn | AAA | K | standard genetic code translation of AAA | null | null | [] | {"differs_in_tables": {"14": "N", "21": "N", "9": "N"}, "standard_aa": "K", "table_count": 27} |
bio/cdn | AAG | K | standard genetic code translation of AAG | null | null | [] | {"standard_aa": "K", "table_count": 27} |
bio/cdn | AGT | S | standard genetic code translation of AGT | null | null | [] | {"standard_aa": "S", "table_count": 27} |
bio/cdn | AGC | S | standard genetic code translation of AGC | null | null | [] | {"standard_aa": "S", "table_count": 27} |
bio/cdn | AGA | R | standard genetic code translation of AGA | null | null | [] | {"differs_in_tables": {"13": "G", "14": "S", "2": "*", "21": "S", "24": "S", "33": "S", "5": "S", "9": "S"}, "standard_aa": "R", "table_count": 27} |
bio/cdn | AGG | R | standard genetic code translation of AGG | null | null | [] | {"differs_in_tables": {"13": "G", "14": "S", "2": "*", "21": "S", "24": "K", "33": "K", "5": "S", "9": "S"}, "standard_aa": "R", "table_count": 27} |
bio/cdn | GTT | V | standard genetic code translation of GTT | null | null | [] | {"standard_aa": "V", "table_count": 27} |
bio/cdn | GTC | V | standard genetic code translation of GTC | null | null | [] | {"standard_aa": "V", "table_count": 27} |
bio/cdn | GTA | V | standard genetic code translation of GTA | null | null | [] | {"standard_aa": "V", "table_count": 27} |
bio/cdn | GTG | V | standard genetic code translation of GTG | null | null | [] | {"standard_aa": "V", "start_codon_in_tables": ["11", "13", "2", "21", "23", "24", "25", "3", "32", "33", "4", "5", "9"], "table_count": 27} |
bio/cdn | GCT | A | standard genetic code translation of GCT | null | null | [] | {"standard_aa": "A", "table_count": 27} |
bio/cdn | GCC | A | standard genetic code translation of GCC | null | null | [] | {"standard_aa": "A", "table_count": 27} |
bio/cdn | GCA | A | standard genetic code translation of GCA | null | null | [] | {"standard_aa": "A", "table_count": 27} |
bio/cdn | GCG | A | standard genetic code translation of GCG | null | null | [] | {"standard_aa": "A", "table_count": 27} |
bio/cdn | GAT | D | standard genetic code translation of GAT | null | null | [] | {"standard_aa": "D", "table_count": 27} |
bio/cdn | GAC | D | standard genetic code translation of GAC | null | null | [] | {"standard_aa": "D", "table_count": 27} |
bio/cdn | GAA | E | standard genetic code translation of GAA | null | null | [] | {"standard_aa": "E", "table_count": 27} |
bio/cdn | GAG | E | standard genetic code translation of GAG | null | null | [] | {"standard_aa": "E", "table_count": 27} |
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